The Colletotrichum gigasporum species complex
Identifieur interne : 000902 ( Main/Exploration ); précédent : 000901; suivant : 000903The Colletotrichum gigasporum species complex
Auteurs : F. Liu [République populaire de Chine, Pays-Bas] ; L. Cai [République populaire de Chine] ; P. W. Crous [Pays-Bas] ; U. Damm [Pays-Bas, Allemagne]Source :
- Persoonia : Molecular Phylogeny and Evolution of Fungi [ 0031-5850 ] ; 2014.
Abstract
In a preliminary analysis, 21
Url:
DOI: 10.3767/003158514X684447
PubMed: 25737595
PubMed Central: 4312939
Affiliations:
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Liu</name><affiliation wicri:level="1"><nlm:aff id="A1">Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101, China;</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101</wicri:regionArea><wicri:noRegion>100101</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:aff id="A2">Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht</wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation></author><author><name sortKey="Cai, L" sort="Cai, L" uniqKey="Cai L" first="L." last="Cai">L. Cai</name><affiliation wicri:level="1"><nlm:aff id="A1">Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101, China;</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101</wicri:regionArea><wicri:noRegion>100101</wicri:noRegion></affiliation></author><author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><affiliation wicri:level="4"><nlm:aff id="A2">Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht</wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="A3">CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="A4">Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen</wicri:regionArea><wicri:noRegion>6708 PB Wageningen</wicri:noRegion></affiliation></author><author><name sortKey="Damm, U" sort="Damm, U" uniqKey="Damm U" first="U." last="Damm">U. Damm</name><affiliation wicri:level="1"><nlm:aff id="A3">CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="A5">Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Allemagne</country><wicri:regionArea>Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz</wicri:regionArea><wicri:noRegion>02806 Görlitz</wicri:noRegion><wicri:noRegion>02806 Görlitz</wicri:noRegion><wicri:noRegion>02806 Görlitz</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25737595</idno><idno type="pmc">4312939</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4312939</idno><idno type="RBID">PMC:4312939</idno><idno type="doi">10.3767/003158514X684447</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">001246</idno><idno type="wicri:Area/Pmc/Curation">001244</idno><idno type="wicri:Area/Pmc/Checkpoint">000691</idno><idno type="wicri:Area/Ncbi/Merge">001A22</idno><idno type="wicri:Area/Ncbi/Curation">001A22</idno><idno type="wicri:Area/Ncbi/Checkpoint">001A22</idno><idno type="wicri:Area/Main/Merge">000902</idno><idno type="wicri:Area/Main/Curation">000902</idno><idno type="wicri:Area/Main/Exploration">000902</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">The <italic>Colletotrichum gigasporum</italic> species complex</title><author><name sortKey="Liu, F" sort="Liu, F" uniqKey="Liu F" first="F." last="Liu">F. Liu</name><affiliation wicri:level="1"><nlm:aff id="A1">Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101, China;</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101</wicri:regionArea><wicri:noRegion>100101</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:aff id="A2">Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht</wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation></author><author><name sortKey="Cai, L" sort="Cai, L" uniqKey="Cai L" first="L." last="Cai">L. Cai</name><affiliation wicri:level="1"><nlm:aff id="A1">Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101, China;</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences, Institute of Microbiology, State Key Laboratory of Mycology, Beijing, 100101</wicri:regionArea><wicri:noRegion>100101</wicri:noRegion></affiliation></author><author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><affiliation wicri:level="4"><nlm:aff id="A2">Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>Utrecht University, Department of Biology, Microbiology, Padualaan 8, 3584 CH Utrecht</wicri:regionArea><orgName type="university">Université d'Utrecht</orgName><placeName><settlement type="city">Utrecht</settlement><region nuts="2">Utrecht (province)</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="A3">CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="A4">Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen</wicri:regionArea><wicri:noRegion>6708 PB Wageningen</wicri:noRegion></affiliation></author><author><name sortKey="Damm, U" sort="Damm, U" uniqKey="Damm U" first="U." last="Damm">U. Damm</name><affiliation wicri:level="1"><nlm:aff id="A3">CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Pays-Bas</country><wicri:regionArea>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht</wicri:regionArea><wicri:noRegion>3584 CT Utrecht</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="A5">Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Allemagne</country><wicri:regionArea>Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz</wicri:regionArea><wicri:noRegion>02806 Görlitz</wicri:noRegion><wicri:noRegion>02806 Görlitz</wicri:noRegion><wicri:noRegion>02806 Görlitz</wicri:noRegion></affiliation></author></analytic><series><title level="j">Persoonia : Molecular Phylogeny and Evolution of Fungi</title><idno type="ISSN">0031-5850</idno><idno type="eISSN">1878-9080</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>In a preliminary analysis, 21 <italic>Colletotrichum</italic> strains with large conidia preserved in the CBS culture collection clustered with a recently described species, <italic>C. gigasporum</italic>, forming a clade distinct from other currently known <italic>Colletotrichum</italic> species complexes<italic>.</italic> Multi-locus phylogenetic analyses (ITS, ACT, TUB2, CHS-1, GAPDH) as well as each of the single-locus analyses resolved seven distinct species, one of them being <italic>C. gigasporum. Colletotrichum gigasporum</italic> and its close allies thus constitute a previously unknown species complex with shared morphological features. Five of the seven species accepted in the <italic>C. gigasporum</italic> species complex are described here as novel species, namely <italic>C. arxii</italic>, <italic>C. magnisporum</italic>, <italic>C. pseudomajus</italic>,<italic> C. radicis</italic> and <italic>C. vietnamense</italic>. A species represented by a single sterile strain, namely CBS 159.50, was not described as novel species, and is treated as <italic>Colletotrichum</italic> sp. CBS 159.50. Furthermore, <italic>C. thailandicum</italic> is reduced to synonymy with <italic>C. gigasporum</italic>.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Allescher, A" uniqKey="Allescher A">A Allescher</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Arx, Ja Von" uniqKey="Arx J">JA von Arx</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cannon, Pf" uniqKey="Cannon P">PF Cannon</name></author><author><name sortKey="Damm, U" uniqKey="Damm U">U Damm</name></author><author><name sortKey="Johnston, Pr" uniqKey="Johnston P">PR Johnston</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Carbone, I" uniqKey="Carbone I">I Carbone</name></author><author><name sortKey="Kohn, Lm" uniqKey="Kohn L">LM Kohn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Castro, Lgm" uniqKey="Castro L">LGM 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Liu</name></noRegion><name sortKey="Cai, L" sort="Cai, L" uniqKey="Cai L" first="L." last="Cai">L. Cai</name></country><country name="Pays-Bas"><region name="Utrecht (province)"><name sortKey="Liu, F" sort="Liu, F" uniqKey="Liu F" first="F." last="Liu">F. Liu</name></region><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name><name sortKey="Damm, U" sort="Damm, U" uniqKey="Damm U" first="U." last="Damm">U. Damm</name></country><country name="Allemagne"><noRegion><name sortKey="Damm, U" sort="Damm, U" uniqKey="Damm U" first="U." last="Damm">U. Damm</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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